TAP PHD in Capsella rubella

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

PHD
Alfin-like
Homeobox
zf-TAZ
ARID
zf-MIZ
zf-CCCH
HMG_box
DDT
Myb_DNA-binding
JmjC
JmjN
SWIB

(Domain names are clickable)



List of proteins (28)

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namename additionClick button to show/hide sequence: Download sequence?
Carubv10000223mpacid=20909284 transcript=Carubv10000223m locus=Carubv10000223m.g ID=Carubv10000223m.v1.0 annot-version=v1.0
Carubv10001176mpacid=20910672 transcript=Carubv10001176m locus=Carubv10001176m.g ID=Carubv10001176m.v1.0 annot-version=v1.0
Carubv10001305mpacid=20910049 transcript=Carubv10001305m locus=Carubv10001305m.g ID=Carubv10001305m.v1.0 annot-version=v1.0
Carubv10002728mpacid=20908935 transcript=Carubv10002728m locus=Carubv10002728m.g ID=Carubv10002728m.v1.0 annot-version=v1.0
Carubv10002790mpacid=20907926 transcript=Carubv10002790m locus=Carubv10002790m.g ID=Carubv10002790m.v1.0 annot-version=v1.0
Carubv10004051mpacid=20896001 transcript=Carubv10004051m locus=Carubv10004051m.g ID=Carubv10004051m.v1.0 annot-version=v1.0
Carubv10008137mpacid=20889056 transcript=Carubv10008137m locus=Carubv10008137m.g ID=Carubv10008137m.v1.0 annot-version=v1.0
Carubv10008150mpacid=20889285 transcript=Carubv10008150m locus=Carubv10008150m.g ID=Carubv10008150m.v1.0 annot-version=v1.0
Carubv10008192mpacid=20889270 transcript=Carubv10008192m locus=Carubv10008192m.g ID=Carubv10008192m.v1.0 annot-version=v1.0
Carubv10008502mpacid=20889103 transcript=Carubv10008502m locus=Carubv10008502m.g ID=Carubv10008502m.v1.0 annot-version=v1.0
Carubv10009144mpacid=20891359 transcript=Carubv10009144m locus=Carubv10009144m.g ID=Carubv10009144m.v1.0 annot-version=v1.0
Carubv10012794mpacid=20899373 transcript=Carubv10012794m locus=Carubv10012794m.g ID=Carubv10012794m.v1.0 annot-version=v1.0
Carubv10012838mpacid=20898826 transcript=Carubv10012838m locus=Carubv10012838m.g ID=Carubv10012838m.v1.0 annot-version=v1.0
Carubv10012943mpacid=20899776 transcript=Carubv10012943m locus=Carubv10012943m.g ID=Carubv10012943m.v1.0 annot-version=v1.0
Carubv10013115mpacid=20898791 transcript=Carubv10013115m locus=Carubv10013115m.g ID=Carubv10013115m.v1.0 annot-version=v1.0
Carubv10013235mpacid=20900661 transcript=Carubv10013235m locus=Carubv10013235m.g ID=Carubv10013235m.v1.0 annot-version=v1.0
Carubv10015310mpacid=20899736 transcript=Carubv10015310m locus=Carubv10015310m.g ID=Carubv10015310m.v1.0 annot-version=v1.0
Carubv10016636mpacid=20887363 transcript=Carubv10016636m locus=Carubv10016636m.g ID=Carubv10016636m.v1.0 annot-version=v1.0
Carubv10019360mpacid=20886033 transcript=Carubv10019360m locus=Carubv10019360m.g ID=Carubv10019360m.v1.0 annot-version=v1.0
Carubv10019576mpacid=20887721 transcript=Carubv10019576m locus=Carubv10019576m.g ID=Carubv10019576m.v1.0 annot-version=v1.0
Carubv10020044mpacid=20906027 transcript=Carubv10020044m locus=Carubv10020044m.g ID=Carubv10020044m.v1.0 annot-version=v1.0
Carubv10020138mpacid=20906994 transcript=Carubv10020138m locus=Carubv10020138m.g ID=Carubv10020138m.v1.0 annot-version=v1.0
Carubv10021321mpacid=20906567 transcript=Carubv10021321m locus=Carubv10021321m.g ID=Carubv10021321m.v1.0 annot-version=v1.0
Carubv10022635mpacid=20901290 transcript=Carubv10022635m locus=Carubv10022635m.g ID=Carubv10022635m.v1.0 annot-version=v1.0
Carubv10025333mpacid=20902044 transcript=Carubv10025333m locus=Carubv10025333m.g ID=Carubv10025333m.v1.0 annot-version=v1.0
Carubv10025733mpacid=20911729 transcript=Carubv10025733m locus=Carubv10025733m.g ID=Carubv10025733m.v1.0 annot-version=v1.0
Carubv10025786mpacid=20913233 transcript=Carubv10025786m locus=Carubv10025786m.g ID=Carubv10025786m.v1.0 annot-version=v1.0
Carubv10028608mpacid=20913449 transcript=Carubv10028608m locus=Carubv10028608m.g ID=Carubv10028608m.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum